Transcript: KCNMA1-AS1:1

Basic information

LNCipedia transcript ID: KCNMA1-AS1:1 
LNCipedia gene ID: KCNMA1-AS1
Location (hg38): chr10:76888044-76904090
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2525 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000429850.1; RP11-443A13.2-001; OTTHUMT00000048850.1
Alternative gene names: ENSG00000236467.1; RP11-443A13.2; OTTHUMG00000018535.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.9861 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNMA1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf11-2:1
4.0 KCNMA1-AS1:1
4.1 KCNMA1-AS1:1
5.0 KCNMA1-AS1:1
5.1 KCNMA1-AS1:1
5.2 KCNMA1-AS1:1