Transcript: KCNMA1-AS1:2

Basic information

LNCipedia transcript ID: KCNMA1-AS1:2 
HGNC Gene Symbol: KCNMA1-AS1    
HGNC Full Gene Name: KCNMA1 antisense RNA 1
Ensembl Gene ID: ENSG00000236467
Ensembl Transcript ID: ENST00000429850
Location (hg38): chr10:76888044-76905131
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3566 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT014143; ENST00000429850.2
Alternative gene names: ENSG00000236467.3; RP11-443A13.5; ENSG00000236467.8; KCNMA1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.9861 non-coding 
CPAT coding probability 5.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNMA1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf11-2:2
4.0 KCNMA1-AS1:2
4.1 KCNMA1-AS1:2
5.0 KCNMA1-AS1:2
5.1 KCNMA1-AS1:2
5.2 KCNMA1-AS1:2