Transcript: KCNMA1-AS3:3

Basic information

LNCipedia transcript ID: KCNMA1-AS3:3 
HGNC Gene Symbol: KCNMA1-AS3    
HGNC Full Gene Name: KCNMA1 antisense RNA 3
Ensembl Gene ID: ENSG00000225652
Ensembl Transcript ID: ENST00000418515
Location (hg38): chr10:77354404-77376613
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 701 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418515.1; RP11-619F23.2-001; OTTHUMT00000048855.1; NONHSAT014157
Alternative gene names: ENSG00000225652.1; RP11-619F23.2; OTTHUMG00000018539.1; KCNMA1-AS3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.9721 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNMA1-AS3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL391421.1-4:1
4.0 KCNMA1-AS3:3
4.1 KCNMA1-AS3:3
5.0 KCNMA1-AS3:3
5.1 KCNMA1-AS3:3
5.2 KCNMA1-AS3:3