Transcript: KCNQ1-AS1:3

Basic information

LNCipedia transcript ID: KCNQ1-AS1:3 
LNCipedia gene ID: KCNQ1-AS1
RefSeq ID: NR_130721
Location (hg38): chr11:2840135-2861569
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1085 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130721.1
Alternative gene names: KCNQ1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.2258 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNQ1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 KCNQ1-AS1:3
5.1 KCNQ1-AS1:3
5.2 KCNQ1-AS1:3