Transcript: KCTD21-AS1:10

Basic information

LNCipedia transcript ID: KCTD21-AS1:10 
HGNC Gene Symbol: KCTD21-AS1    
HGNC Full Gene Name: KCTD21 antisense RNA 1
Ensembl Gene ID: ENSG00000246174
Ensembl Transcript ID: ENST00000527321
Location (hg38): chr11:78139815-78141922
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 586 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000527321; ENST00000527321.1; RP11-705O3.1-005; OTTHUMT00000390650.1; NONHSAT023260
Alternative gene names: ENSG00000246174; RP11-705O3.1; ENSG00000246174.2; OTTHUMG00000166595.1; ENSG00000246174.3; KCTD21-AS1; ENSG00000246174.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.549 non-coding 
CPAT coding probability 10.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCTD21-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP35-1:7
3.1 lnc-USP35-1:7
4.0 KCTD21-AS1:10
4.1 KCTD21-AS1:10
5.0 KCTD21-AS1:10
5.1 KCTD21-AS1:10
5.2 KCTD21-AS1:10