Transcript: KCTD21-AS1:11

Basic information

LNCipedia transcript ID: KCTD21-AS1:11 
LNCipedia gene ID: KCTD21-AS1
Location (hg38): chr11:78139818-78141423
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 283 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019402; NONHSAT023261
Alternative gene names: XLOC_009224; linc-USP35;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.558 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCTD21-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP35-1:8
3.1 lnc-USP35-1:8
4.0 KCTD21-AS1:11
4.1 KCTD21-AS1:11
5.0 KCTD21-AS1:11
5.1 KCTD21-AS1:11
5.2 KCTD21-AS1:11