Transcript: KCTD21-AS1:12

Basic information

LNCipedia transcript ID: KCTD21-AS1:12 
LNCipedia gene ID: KCTD21-AS1
Location (hg38): chr11:78139866-78141744
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 357 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00019956
Alternative gene names: XLOC_009224; linc-USP35;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.549 non-coding 
CPAT coding probability 10.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCTD21-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP35-1:9
3.1 lnc-USP35-1:9
4.0 KCTD21-AS1:12
4.1 KCTD21-AS1:12
5.0 KCTD21-AS1:12
5.1 KCTD21-AS1:12
5.2 KCTD21-AS1:12