Transcript: KCTD21-AS1:28

Basic information

LNCipedia transcript ID: KCTD21-AS1:28 
LNCipedia gene ID: KCTD21-AS1
Location (hg38): chr11:78150121-78150666
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 546 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT023264; FPKM1_group_4982_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCTD21-AS1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP35-14:1
4.0 lnc-USP35-14:1
4.1 KCTD21-AS1:28
5.0 KCTD21-AS1:28
5.1 KCTD21-AS1:28
5.2 KCTD21-AS1:28