Transcript: KCTD21-AS1:30

Basic information

LNCipedia transcript ID: KCTD21-AS1:30 
LNCipedia gene ID: KCTD21-AS1
Location (hg38): chr11:78163628-78164786
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 629 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT023268; FPKM1_group_4984_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -185.7205 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCTD21-AS1:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP35-12:1
4.0 lnc-USP35-12:1
4.1 KCTD21-AS1:30
5.0 KCTD21-AS1:30
5.1 KCTD21-AS1:30
5.2 KCTD21-AS1:30