Transcript: KIRREL3-AS2:3

Basic information

LNCipedia transcript ID: KIRREL3-AS2:3 
HGNC Gene Symbol: KIRREL3-AS2    
HGNC Full Gene Name: KIRREL3 antisense RNA 2
Ensembl Gene ID: ENSG00000254960
Ensembl Transcript ID: ENST00000578084
Location (hg38): chr11:126940794-126945090
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 429 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000578084.1; KIRREL3-AS2-002; OTTHUMT00000447189.1; NONHSAT025037
Alternative gene names: ENSG00000254960.2; KIRREL3-AS2; OTTHUMG00000165803.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.0807 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KIRREL3-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-688I9.2.1-4:2
4.0 KIRREL3-AS2:3
4.1 KIRREL3-AS2:3
5.0 KIRREL3-AS2:3
5.1 KIRREL3-AS2:3
5.2 KIRREL3-AS2:3