Transcript: KIRREL3-AS3:1

Basic information

LNCipedia transcript ID: KIRREL3-AS3:1 
HGNC Gene Symbol: KIRREL3-AS3    
HGNC Full Gene Name: KIRREL3 antisense RNA 3
Ensembl Gene ID: ENSG00000218109
Ensembl Transcript ID: ENST00000525678
RefSeq ID: NR_040078
Location (hg38): chr11:127002910-127006058
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1768 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000525678.1; KIRREL3-AS3-001; OTTHUMT00000386284.2; NONHSAT025041; NR_040078; NR_040078.1
Alternative gene names: ENSG00000218109.3; KIRREL3-AS3; OTTHUMG00000165805.2; ENSG00000218109.5; FLJ40224


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.7592 non-coding 
CPAT coding probability 52.42% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
KIRREL3-AS3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-688I9.2.1-2:1
4.0 KIRREL3-AS3:1
4.1 KIRREL3-AS3:1
5.0 KIRREL3-AS3:1
5.1 KIRREL3-AS3:1
5.2 KIRREL3-AS3:1