Transcript: KIRREL3-AS3:3

Basic information

LNCipedia transcript ID: KIRREL3-AS3:3 
HGNC Gene Symbol: KIRREL3-AS3    
HGNC Full Gene Name: KIRREL3 antisense RNA 3
Ensembl Gene ID: ENSG00000218109
Ensembl Transcript ID: ENST00000404882
Location (hg38): chr11:127003403-127004235
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 831 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000404882.3
Alternative gene names: ENSG00000218109.5; KIRREL3-AS3; FLJ40224


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -288.8018 non-coding 
CPAT coding probability 89.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
KIRREL3-AS3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 KIRREL3-AS3:3
4.1 KIRREL3-AS3:3
5.0 KIRREL3-AS3:3
5.1 KIRREL3-AS3:3
5.2 KIRREL3-AS3:3