Transcript: KIZ-AS1:6

Basic information

LNCipedia transcript ID: KIZ-AS1:6 
LNCipedia gene ID: KIZ-AS1
Ensembl Gene ID: ENSG00000228604
Ensembl Transcript ID: ENST00000425746
Location (hg38): chr20:21151668-21162890
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 387 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT078921; ENST00000425746.2
Alternative gene names: ENSG00000228604.3; RP5-872K7.7; ; AL121759.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.7222 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KIZ-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NKX2-4-2:5
4.0 KIZ-AS1:6
4.1 KIZ-AS1:6
5.0 KIZ-AS1:6
5.1 KIZ-AS1:6
5.2 KIZ-AS1:6