Transcript: KIZ-AS1:7

Basic information

LNCipedia transcript ID: KIZ-AS1:7 
LNCipedia gene ID: KIZ-AS1
Location (hg38): chr20:21148741-21158741
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 766 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000434043; ENST00000434043.1; RP5-872K7.7-002; OTTHUMT00000078252.1; NONHSAT078919
Alternative gene names: ENSG00000228604; RP5-872K7.7; ENSG00000228604.1; OTTHUMG00000032014.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.4499 non-coding 
CPAT coding probability 5.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KIZ-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NKX2-4-2:2
3.1 lnc-NKX2-4-2:2
4.0 KIZ-AS1:7
4.1 KIZ-AS1:7
5.0 KIZ-AS1:7
5.1 KIZ-AS1:7
5.2 KIZ-AS1:7