Transcript: KLF3-AS1:2

Basic information

LNCipedia transcript ID: KLF3-AS1:2 
HGNC Gene Symbol: KLF3-AS1    
HGNC Full Gene Name: KLF3 antisense RNA 1
Ensembl Gene ID: ENSG00000231160
Ensembl Transcript ID: ENST00000620339
Location (hg38): chr4:38625226-38664883
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 558 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620339.4
Alternative gene names: ENSG00000231160.9; KLF3-AS1; FLJ13197


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.9361 non-coding 
CPAT coding probability 6.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KLF3-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 KLF3-AS1:2
4.1 KLF3-AS1:2
5.0 KLF3-AS1:2
5.1 KLF3-AS1:2
5.2 KLF3-AS1:2