Transcript: KRTAP5-AS1:1
Basic information
LNCipedia transcript ID: KRTAP5-AS1:1
HGNC Gene Symbol: KRTAP5-AS1
HGNC Full Gene Name:
KRTAP5-1/KRTAP5-2 antisense RNA 1
Ensembl Gene ID:
ENSG00000233930
Ensembl Transcript ID:
ENST00000524947
Location (hg38): chr11:1571353-1597583
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 570 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000524947; ENST00000524947.1; RP13-25N22.1-004; OTTHUMT00000393046.1; NONHSAT017406
Alternative gene names: ENSG00000233930; RP13-25N22.1; ENSG00000233930.3; OTTHUMG00000165546.3; KRTAP5-AS1;
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
KRTAP5-AS1:1 | no | no | no | no |
Available literature
- Song (2017), Non-coding RNAs participate in the regulatory network of CLDN4 via ceRNA mediated miRNA evasion., Nat Commun
- Miano (2016), Luminal long non-coding RNAs regulated by estrogen receptor alpha in a ligand-independent manner show functional roles in breast cancer., Oncotarget
- Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-KRTAP5-5-1:1 |
3.1 | lnc-KRTAP5-5-1:1 |
4.0 | KRTAP5-AS1:1 |
4.1 | KRTAP5-AS1:1 |
5.0 | KRTAP5-AS1:1 |
5.1 | KRTAP5-AS1:1 |
5.2 | KRTAP5-AS1:1 |