Transcript: L3MBTL4-AS1:3

Basic information

LNCipedia transcript ID: L3MBTL4-AS1:3 
HGNC Gene Symbol: L3MBTL4-AS1    
HGNC Full Gene Name: L3MBTL4 antisense RNA 1
Ensembl Gene ID: ENSG00000264707
Ensembl Transcript ID: ENST00000578427
Location (hg38): chr18:6256747-6260934
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2044 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000578427.1; RP11-760N9.1-001; OTTHUMT00000443624.1; NONHSAT057107
Alternative gene names: ENSG00000264707.1; RP11-760N9.1; OTTHUMG00000178852.1; L3MBTL4-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.2838 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
L3MBTL4-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP28-4:1
4.0 L3MBTL4-AS1:3
4.1 L3MBTL4-AS1:3
5.0 L3MBTL4-AS1:3
5.1 L3MBTL4-AS1:3
5.2 L3MBTL4-AS1:3