Transcript: LANCL1-AS1:3

Basic information

LNCipedia transcript ID: LANCL1-AS1:3 
LNCipedia gene ID: LANCL1-AS1
RefSeq ID: NR_110606
Location (hg38): chr2:210324712-210470333
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1984 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110606; NR_110606.1
Alternative gene names: LANCLOT; LANCL1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -115.0505 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LANCL1-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPS1-1:4
4.0 LANCL1-AS1:3
4.1 LANCL1-AS1:3
5.0 LANCL1-AS1:3
5.1 LANCL1-AS1:3
5.2 LANCL1-AS1:3