Transcript: LARGE-AS1:15

Basic information

LNCipedia transcript ID: LARGE-AS1:15 
LNCipedia gene ID: LARGE-AS1
RefSeq ID: NR_038950
Location (hg38): chr22:33724986-33750817
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1080 bp
Exons: 7
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038950.1
Alternative gene names: LARGE-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.5995 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LARGE-AS1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LARGE-AS1:15
5.1 LARGE-AS1:15
5.2 LARGE-AS1:15