Transcript: LARGE-AS1:2

Basic information

LNCipedia transcript ID: LARGE-AS1:2 
LNCipedia gene ID: LARGE-AS1
Location (hg38): chr22:33724986-33750816
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1079 bp
Exons: 7
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT085012; NR_038950
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.5995 non-coding 
CPAT coding probability 2.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LARGE-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIMP3-6:9
4.0 LARGE-AS1:2
4.1 LARGE-AS1:2
5.0 LARGE-AS1:2
5.1 LARGE-AS1:2
5.2 LARGE-AS1:2