Transcript: LARGE-AS1:5

Basic information

LNCipedia transcript ID: LARGE-AS1:5 
LNCipedia gene ID: LARGE-AS1
Location (hg38): chr22:33725017-33750728
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1115 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT085014
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.5995 non-coding 
CPAT coding probability 2.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LARGE-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIMP3-6:11
4.0 LARGE-AS1:5
4.1 LARGE-AS1:5
5.0 LARGE-AS1:5
5.1 LARGE-AS1:5
5.2 LARGE-AS1:5