Transcript: LARGE-IT1:1

Basic information

LNCipedia transcript ID: LARGE-IT1:1 
HGNC Gene Symbol: LARGE-IT1    
HGNC Full Gene Name: LARGE intronic transcript 1
Ensembl Gene ID: ENSG00000232081
Ensembl Transcript ID: ENST00000445391
Location (hg38): chr22:33723832-33724912
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 558 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445391.1; LARGE-IT1-001; OTTHUMT00000320517.1; NONHSAT085010
Alternative gene names: ENSG00000232081.1; LARGE-IT1; OTTHUMG00000150915.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.2313 non-coding 
CPAT coding probability 10.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LARGE-IT1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SYN3-4:1
4.0 LARGE-IT1:1
4.1 LARGE-IT1:1
5.0 LARGE-IT1:1
5.1 LARGE-IT1:1
5.2 LARGE-IT1:1