Transcript: LBX1-AS1:4

Basic information

LNCipedia transcript ID: LBX1-AS1:4 
HGNC Gene Symbol: LBX1-AS1    
HGNC Full Gene Name: LBX1 antisense RNA 1
Ensembl Gene ID: ENSG00000227128
Ensembl Transcript ID: ENST00000546988
Location (hg38): chr10:101229611-101238237
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 684 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000546988.2
Alternative gene names: ENSG00000227128.4; LBX1-AS1; FLJ41350


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -190.9054 non-coding 
CPAT coding probability 25.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LBX1-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LBX1-AS1:4
4.1 LBX1-AS1:4
5.0 LBX1-AS1:4
5.1 LBX1-AS1:4
5.2 LBX1-AS1:4