Transcript: LCMT1-AS1:16

Basic information

LNCipedia transcript ID: LCMT1-AS1:16 
LNCipedia gene ID: LCMT1-AS1
Location (hg38): chr16:25106180-25107097
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 918 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260448.1|FTMT26200001496.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.458 non-coding 
CPAT coding probability 17.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LCMT1-AS1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LCMT1-AS1:16
5.0 LCMT1-AS1:16
5.1 LCMT1-AS1:16
5.2 LCMT1-AS1:16