Transcript: LCMT1-AS1:19

Basic information

LNCipedia transcript ID: LCMT1-AS1:19 
LNCipedia gene ID: LCMT1-AS1
Location (hg38): chr16:25071490-25072727
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 676 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT141295
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.6627 non-coding 
CPAT coding probability 4.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LCMT1-AS1:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP17-9:1
4.0 lnc-ARHGAP17-9:1
4.1 LCMT1-AS1:19
5.0 LCMT1-AS1:19
5.1 LCMT1-AS1:19
5.2 LCMT1-AS1:19