Transcript: LCMT1-AS2:2

Basic information

LNCipedia transcript ID: LCMT1-AS2:2 
LNCipedia gene ID: LCMT1-AS2
RefSeq ID: NR_039998
Location (hg38): chr16:25140571-25149032
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2607 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT141390; NR_039998; NR_039998.1
Alternative gene names: ; LCMT1-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.7976 non-coding 
CPAT coding probability 26.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LCMT1-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZKSCAN2-1:3
4.0 LCMT1-AS2:2
4.1 LCMT1-AS2:2
5.0 LCMT1-AS2:2
5.1 LCMT1-AS2:2
5.2 LCMT1-AS2:2