Transcript: LEMD1-AS1:1

Basic information

LNCipedia transcript ID: LEMD1-AS1:1 
HGNC Gene Symbol: LEMD1-AS1    
HGNC Full Gene Name: LEMD1 antisense RNA 1
Ensembl Gene ID: ENSG00000226235
Ensembl Transcript ID: ENST00000447832
RefSeq ID: NR_038425
Location (hg38): chr1:205373252-205387440
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2781 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000447832.1; RP11-576D8.2-001; OTTHUMT00000090400.1; NONHSAT008992; NR_038425; NR_038425.1
Alternative gene names: ENSG00000226235.1; RP11-576D8.2; OTTHUMG00000037200.1; LEMD1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.2295 non-coding 
CPAT coding probability 3.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LEMD1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMCC2-1:1
4.0 LEMD1-AS1:1
4.1 LEMD1-AS1:1
5.0 LEMD1-AS1:1
5.1 LEMD1-AS1:1
5.2 LEMD1-AS1:1