Transcript: LGALS8-AS1:2

Basic information

LNCipedia transcript ID: LGALS8-AS1:2 
HGNC Gene Symbol: LGALS8-AS1    
HGNC Full Gene Name: LGALS8 antisense RNA 1
Ensembl Gene ID: ENSG00000223776
Ensembl Transcript ID: ENST00000487567
Location (hg38): chr1:236523052-236524508
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1457 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000487567.2
Alternative gene names: ENSG00000223776.5; LGALS8-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -126.7128 non-coding 
CPAT coding probability 32.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LGALS8-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LGALS8-AS1:2
4.1 LGALS8-AS1:2
5.0 LGALS8-AS1:2
5.1 LGALS8-AS1:2
5.2 LGALS8-AS1:2