Transcript: LHFPL3-AS2:12

Basic information

LNCipedia transcript ID: LHFPL3-AS2:12 
LNCipedia gene ID: LHFPL3-AS2
Location (hg38): chr7:104894545-104926627
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2407 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225329.1|HBMT00001345533.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.9581 non-coding 
CPAT coding probability 8.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LHFPL3-AS2:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LHFPL3-AS2:12
5.0 LHFPL3-AS2:12
5.1 LHFPL3-AS2:12
5.2 LHFPL3-AS2:12