Transcript: LHFPL3-AS2:2

Basic information

LNCipedia transcript ID: LHFPL3-AS2:2 
HGNC Gene Symbol: LHFPL3-AS2    
HGNC Full Gene Name: LHFPL3 antisense RNA 2
Ensembl Gene ID: ENSG00000225329
Ensembl Transcript ID: ENST00000631061
RefSeq ID: NR_027374
Location (hg38): chr7:104894628-104926645
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1832 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT122573; NR_027374; ENST00000631061.2; NR_027374.1
Alternative gene names: ENSG00000225329.3; LHFPL3-AS2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.9581 non-coding 
CPAT coding probability 27.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LHFPL3-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRPK2-3:3
4.0 LHFPL3-AS2:2
4.1 LHFPL3-AS2:2
5.0 LHFPL3-AS2:2
5.1 LHFPL3-AS2:2
5.2 LHFPL3-AS2:2