Transcript: LHX4-AS1:9

Basic information

LNCipedia transcript ID: LHX4-AS1:9 
HGNC Gene Symbol: LHX4-AS1    
HGNC Full Gene Name: LHX4 antisense RNA 1
RefSeq ID: NR_037642
Location (hg38): chr1:180269663-180274681
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2657 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037642; NR_037642.1
Alternative gene names: LHX4-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 246.5335 coding 
CPAT coding probability 28.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LHX4-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACBD6-1:4
4.0 lnc-ACBD6-1:4
4.1 lnc-ACBD6-1:4
5.0 lnc-ACBD6-1:4
5.1 LHX4-AS1:5
5.2 LHX4-AS1:9