Transcript: LIF-AS1:8

Basic information

LNCipedia transcript ID: LIF-AS1:8 
LNCipedia gene ID: LIF-AS1
Location (hg38): chr22:30235374-30240540
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1257 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232530.1|MICT00000232002.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.7558 non-coding 
CPAT coding probability 2.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIF-AS1:8 no no no no

Available literature

  1. Qian (2017), LncRNA expression profile of ΔNp63α in cervical squamous cancers and its suppressive effects on LIF expression., Cytokine


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HORMAD2-1:3
5.0 lnc-HORMAD2-1:3
5.1 LIF-AS1:3
5.2 LIF-AS1:8