Transcript: LILRB1-AS1:3

Basic information

LNCipedia transcript ID: LILRB1-AS1:3 
HGNC Gene Symbol: LILRB1-AS1    
HGNC Full Gene Name: LILRB1 antisense RNA 1
Ensembl Gene ID: ENSG00000224730
Ensembl Transcript ID: ENST00000456337
Location (hg38): chr19:54635722-54638892
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 554 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456337.1
Alternative gene names: ENSG00000224730.1; AC009892.10; LILRB1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.9495 non-coding 
CPAT coding probability 3.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LILRB1-AS1:3 no no no no

Available literature

  1. Zhou (2017), Discovery and validation of immune-associated long non-coding RNA biomarkers associated with clinically molecular subtype and prognosis in diffuse large B cell lymphoma., Mol. Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC009892.10.1-2:1
4.1 lnc-AC009892.10.1-2:1
5.0 lnc-AC009892.10.1-2:1
5.1 LILRB1-AS1:2
5.2 LILRB1-AS1:3