Transcript: LIMD1-AS1:2

Basic information

LNCipedia transcript ID: LIMD1-AS1:2 
LNCipedia gene ID: LIMD1-AS1
Location (hg38): chr3:45676651-45689090
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3492 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT089399
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.5404 non-coding 
CPAT coding probability 31.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIMD1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC6A20-1:3
4.0 LIMD1-AS1:2
4.1 LIMD1-AS1:2
5.0 LIMD1-AS1:2
5.1 LIMD1-AS1:2
5.2 LIMD1-AS1:2