Transcript: LINC-ROR:1
Basic information
LNCipedia transcript ID: LINC-ROR:1
LNCipedia gene ID: LINC-ROR
Location (hg38): chr18:57054582-57072119
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2580 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000553704; ENST00000553704.1; LINC-ROR-001; OTTHUMT00000414322.1
Alternative gene names: ENSG00000258609; CTD-2526M8.1; ENSG00000258609.1; LINC-ROR; OTTHUMG00000171587.1; lincRNA-RoR; lincRNA-ST8SIA3; ROR
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
LINC-ROR:1 | no | no | no | no |
Available literature
- Gao (2016), ROR functions as a ceRNA to regulate Nanog expression by sponging miR-145 and predicts poor prognosis in pancreatic cancer., Oncotarget
- Mohankumar (2016), Extracellular vesicle long noncoding RNA as potential biomarkers of liver cancer., Brief Funct Genomics
- Rosa (2016), Long Noncoding RNA Regulation of Pluripotency., Stem Cells Int
- Bao (2015), The p53-induced lincRNA-p21 derails somatic cell reprogramming by sustaining H3K9me3 and CpG methylation at pluripotency gene promoters., Cell Res.
- Chen (2015), Macrophage infiltration promotes invasiveness of breast cancer cells via activating long non-coding RNA UCA1., Int J Clin Exp Pathol
- Ching (2015), Non-coding yet non-trivial: a review on the computational genomics of lincRNAs., BioData Min
- Eades (2015), lincRNA-RoR and miR-145 regulate invasion in triple-negative breast cancer via targeting ARF6., Mol. Cancer Res.
- Fan (2015), Long non-coding RNA ROR decoys gene-specific histone methylation to promote tumorigenesis., Genome Biol.
- Fan (2015), Erratum to: Long non-coding RNA ROR decoys gene-specific histone methylation to promote tumorigenesis., Genome Biol.
- Tan (2015), Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells., Genome Res.
- Wang (2015), The mitotic regulator Hec1 is a critical modulator of prostate cancer through the long non-coding RNA BX647187 in vitro., Biosci. Rep.
- Yu (2015), Tumor-derived exosomes in cancer progression and treatment failure., Oncotarget
- Batista (2014), m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells., Cell Stem Cell
- Das (2014), lnCeDB: database of human long noncoding RNA acting as competing endogenous RNA., PLoS ONE
- Hou (2014), LincRNA-ROR induces epithelial-to-mesenchymal transition and contributes to breast cancer tumorigenesis and metastasis., Cell Death Dis
- Huang (2014), Long non-coding RNA UCA1 promotes breast tumor growth by suppression of p27 (Kip1)., Cell Death Dis
- Li (2014), Noncoding RNAs: 'our turn' to join the p53 network., J Mol Cell Biol
- Takahashi (2014), Modulation of hypoxia-signaling pathways by extracellular linc-RoR., J. Cell. Sci.
- Takahashi (2014), Extracellular vesicle-mediated transfer of long non-coding RNA ROR modulates chemosensitivity in human hepatocellular cancer., FEBS Open Bio
- Zhang (2014), NRF2/long noncoding RNA ROR signaling regulates mammary stem cell expansion and protects against estrogen genotoxicity., J. Biol. Chem.
- Zhou (2014), Linc-RNA-RoR acts as a "sponge" against mediation of the differentiation of endometrial cancer stem cells by microRNA-145., Gynecol. Oncol.
- Cheng (2013), Repressing the repressor: a lincRNA as a MicroRNA sponge in embryonic stem cell self-renewal., Dev. Cell
- Guan (2013), Switching cell fate, ncRNAs coming to play., Cell Death Dis
- Wang (2013), Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal., Dev. Cell
- Zhang (2013), The human long non-coding RNA-RoR is a p53 repressor in response to DNA damage., Cell Res.
- Kelley (2012), Transposable elements reveal a stem cell-specific class of long noncoding RNAs., Genome Biol.
- Loewer (2010), Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells., Nat. Genet.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-TXNL1-1:1 |
3.1 | lnc-TXNL1-2:1 |
4.0 | LINC-ROR:1 |
4.1 | LINC-ROR:1 |
5.0 | LINC-ROR:1 |
5.1 | LINC-ROR:1 |
5.2 | LINC-ROR:1 |