Transcript: LINC00092:5

Basic information

LNCipedia transcript ID: LINC00092:5 
LNCipedia gene ID: LINC00092
Location (hg38): chr9:96019749-96021762
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1637 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT133410
Alternative gene names: bA346B7.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.2304 non-coding 
CPAT coding probability 23.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00092:5 no no no no

Available literature

  1. Zhao (2017), Long Noncoding RNA LINC00092 Acts in Cancer-Associated Fibroblasts to Drive Glycolysis and Progression of Ovarian Cancer., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSD17B3-1:7
4.0 LINC00092:5
4.1 LINC00092:5
5.0 LINC00092:5
5.1 LINC00092:5
5.2 LINC00092:5