Transcript: LINC00112:2

Basic information

LNCipedia transcript ID: LINC00112:2 
LNCipedia gene ID: LINC00112
Location (hg38): chr21:41715842-41717859
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1023 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029026; NONHSAT082281
Alternative gene names: XLOC_013949; linc-UMODL1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.0258 non-coding 
CPAT coding probability 30.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00112:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MX1-3:1
3.1 lnc-MX1-3:1
4.0 LINC00112:2
4.1 LINC00112:2
5.0 LINC00112:2
5.1 LINC00112:2
5.2 LINC00112:2