Transcript: LINC00112:3

Basic information

LNCipedia transcript ID: LINC00112:3 
LNCipedia gene ID: LINC00112
Location (hg38): chr21:41715842-41716648
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 293 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029025; NONHSAT082282
Alternative gene names: XLOC_013949; linc-UMODL1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.0258 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00112:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MX1-3:2
3.1 lnc-MX1-3:2
4.0 LINC00112:3
4.1 LINC00112:3
5.0 LINC00112:3
5.1 LINC00112:3
5.2 LINC00112:3