Transcript: LINC00112:5

Basic information

LNCipedia transcript ID: LINC00112:5 
LNCipedia gene ID: LINC00112
Location (hg38): chr21:41716375-41717382
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 527 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00029224
Alternative gene names: XLOC_013949; linc-UMODL1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.0258 non-coding 
CPAT coding probability 18.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00112:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MX1-3:4
3.1 lnc-MX1-3:4
4.0 LINC00112:5
4.1 LINC00112:5
5.0 LINC00112:5
5.1 LINC00112:5
5.2 LINC00112:5