Transcript: LINC00112:6

Basic information

LNCipedia transcript ID: LINC00112:6 
LNCipedia gene ID: LINC00112
Location (hg38): chr21:41716436-41717581
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00028750
Alternative gene names: XLOC_013949; linc-UMODL1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.637 non-coding 
CPAT coding probability 4.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00112:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MX1-3:5
3.1 lnc-MX1-3:6
4.0 LINC00112:6
4.1 LINC00112:6
5.0 LINC00112:6
5.1 LINC00112:6
5.2 LINC00112:6