Transcript: LINC00114:1

Basic information

LNCipedia transcript ID: LINC00114:1 
LNCipedia gene ID: LINC00114
Location (hg38): chr21:38739027-38773477
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 850 bp
Exons: 7
Sources: Broad Institute
Alternative transcript names: TCONS_00028757
Alternative gene names: XLOC_014073; linc-ERG-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.2732 non-coding 
CPAT coding probability 25.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00114:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERG-2:1
3.1 lnc-ERG-2:1
4.0 LINC00114:1
4.1 LINC00114:1
5.0 LINC00114:1
5.1 LINC00114:1
5.2 LINC00114:1