Transcript: LINC00114:4

Basic information

LNCipedia transcript ID: LINC00114:4 
LNCipedia gene ID: LINC00114
Location (hg38): chr21:38739021-38768974
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 893 bp
Exons: 6
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00028929; ENST00000442549; ENST00000442549.1; LINC00114-003; OTTHUMT00000207551.1; NONHSAT082119
Alternative gene names: XLOC_014073; linc-ERG-3; ENSG00000223806; NCRNA00114; ENSG00000223806.2; LINC00114; OTTHUMG00000090771.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.4649 non-coding 
CPAT coding probability 6.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00114:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERG-2:2
3.1 lnc-ERG-2:3
4.0 LINC00114:4
4.1 LINC00114:4
5.0 LINC00114:4
5.1 LINC00114:4
5.2 LINC00114:4