Transcript: LINC00114:8

Basic information

LNCipedia transcript ID: LINC00114:8 
LNCipedia gene ID: LINC00114
RefSeq ID: NR_027067
Location (hg38): chr21:38738955-38752257
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 643 bp
Exons: 4
Sources: Broad Institute; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00028755; NR_027067; NR_027067.1
Alternative gene names: XLOC_014073; linc-ERG-3; ; LINC00114


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.2485 non-coding 
CPAT coding probability 4.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00114:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERG-2:5
3.1 lnc-ERG-2:6
4.0 LINC00114:8
4.1 LINC00114:8
5.0 LINC00114:8
5.1 LINC00114:8
5.2 LINC00114:8