Transcript: LINC00115:24

Basic information

LNCipedia transcript ID: LINC00115:24 
LNCipedia gene ID: LINC00115
Location (hg38): chr1:91421-827506
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 853 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000240453.1|FTMT20100027364.1
Alternative gene names: FLJ22639


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 86.3021 coding 
CPAT coding probability 48.43% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00115:24 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00115:24
5.0 LINC00115:24
5.1 LINC00115:24
5.2 LINC00115:24