Transcript: LINC00167:1

Basic information

LNCipedia transcript ID: LINC00167:1 
LNCipedia gene ID: LINC00167
RefSeq ID: NR_024233
Location (hg38): chr11:130002624-130005486
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2863 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT025106; NR_024233; NR_024233.1
Alternative gene names: FLJ31394; LINC00167


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.182 non-coding 
CPAT coding probability 39.37% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00167:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APLP2-1:2
4.0 LINC00167:1
4.1 LINC00167:1
5.0 LINC00167:1
5.1 LINC00167:1
5.2 LINC00167:1