Transcript: LINC00174:21

Basic information

LNCipedia transcript ID: LINC00174:21 
LNCipedia gene ID: LINC00174
Location (hg38): chr7:66423202-66427153
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 721 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1273:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.8597 non-coding 
CPAT coding probability 92.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00174:21 no no no no

Available literature

  1. Shen (2018), STAT1-mediated upregulation of lncRNA LINC00174 functions a ceRNA for miR-1910-3p to facilitate colorectal carcinoma progression through regulation of TAZ., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GUSB-15:1
4.1 LINC00174:21
5.0 LINC00174:21
5.1 LINC00174:21
5.2 LINC00174:21