Transcript: LINC00184:2

Basic information

LNCipedia transcript ID: LINC00184:2 
HGNC Gene Symbol: LINC00184    
HGNC Full Gene Name: long intergenic non-protein coding RNA 184
Ensembl Gene ID: ENSG00000224939
Ensembl Transcript ID: ENST00000429269
RefSeq ID: NR_033927
Location (hg38): chr1:234629311-234634780
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2270 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000429269; ENST00000429269.1; LINC00184-001; OTTHUMT00000092700.1; NONHSAT010293; NR_033927; NR_033927.1
Alternative gene names: ENSG00000224939; NCRNA00184; ENSG00000224939.1; LINC00184; OTTHUMG00000037979.1; HANC


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.8888 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00184:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1orf31-2:2
3.1 lnc-C1orf31-5:2
4.0 LINC00184:2
4.1 LINC00184:2
5.0 LINC00184:2
5.1 LINC00184:2
5.2 LINC00184:2