Transcript: LINC00205:22

Basic information

LNCipedia transcript ID: LINC00205:22 
LNCipedia gene ID: LINC00205
Location (hg38): chr21:45288082-45291738
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1440 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000215447.3|ENST00000400362.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.1306 non-coding 
CPAT coding probability 20.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00205:22 no no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00205:22
5.0 LINC00205:22
5.1 LINC00205:22
5.2 LINC00205:22