Transcript: LINC00207:1

Basic information

LNCipedia transcript ID: LINC00207:1 
HGNC Gene Symbol: LINC00207    
HGNC Full Gene Name: long intergenic non-protein coding RNA 207
Ensembl Gene ID: ENSG00000187012
Ensembl Transcript ID: ENST00000334566
Location (hg38): chr22:44569339-44572210
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 481 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000334566.5; ENST00000334566.9
Alternative gene names: ENSG00000187012.6; LINC00207; ENSG00000187012.10;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.5446 non-coding 
CPAT coding probability 40.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00207:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LINC00207-1:1
4.0 LINC00207:1
4.1 LINC00207:1
5.0 LINC00207:1
5.1 LINC00207:1
5.2 LINC00207:1