Transcript: LINC00208:1

Basic information

LNCipedia transcript ID: LINC00208:1 
HGNC Gene Symbol: LINC00208    
HGNC Full Gene Name: long intergenic non-protein coding RNA 208
Ensembl Gene ID: ENSG00000170983
Ensembl Transcript ID: ENST00000304233
Location (hg38): chr8:11576313-11581342
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2150 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000304233; ENST00000304233.3; LINC00208-001; OTTHUMT00000365946.2; NONHSAT125068
Alternative gene names: ENSG00000170983; NCRNA00208; ENSG00000170983.3; LINC00208; OTTHUMG00000161738.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.9246 non-coding 
CPAT coding probability 1.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00208:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BLK-1:1
3.1 lnc-BLK-1:1
4.0 LINC00208:1
4.1 LINC00208:1
5.0 LINC00208:1
5.1 LINC00208:1
5.2 LINC00208:1